miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|55440211|gb|CV733415.1|CV733415 TTTTTTTTTTTTTTTTGACATAAAAAGCATTACTATNTCCAGATCAGTGAGTNTCCCCAAAAGAAGCCCCGCACAATTCT
TCATTTGCAATCATCATTTCCACTTAAACTACCACATAAACAGATCAATCTACTGCTACTACTACTACTAACATTTTTTT
AGGAAGGCATGCAGCCTAAGCGGAAGTAAACTTGGTGACGGCCTTCGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGC
CGGGGAGGACGAGGCGGACGGAGGTCTGAATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCG
GACTCCCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTC
GGGGTGAACCTGCTTGAGCACCTTGAAGATGTAGATCTTGTAGGTCTCGACGCTCTTCTTCCCCTTCTTCCGCCCCGCCT
TCTTCCCCTCGCC




Most similar to sp|Q7GBK0|H2B7_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7GBK0|H2B7_ORYSJ Histone H2B.7 OS=Oryza sativa subsp. japonica
           GN=H2B.7 PE=2 SV=1
          Length = 153

 Score =  178 bits (451), Expect = 2e-44
 Identities = 92/92 (100%), Positives = 92/92 (100%)
 Frame = -1

Query: 454 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSR 275
           SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSR
Sbjct: 62  SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSR 121

Query: 274 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 179
           EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA
Sbjct: 122 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153